- Scientific Name
- Ochroma pyramidale
- Common Names
- corkwood; balsa;
- Bioproject
- PRJCA017171
- Biosample
- SAMC1276182
- Accession No.
- GWHDOCN00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR795309, CRR795308, CRR795307, CRR795314, CRR795313, more
- GVM variations of the species
- -
- Submitter Organization
- plant genome, BGI
- Contact
- Liu Min, liumin4@genomics.cn
- Sequence author(s)
- Liu Min
- Released Date
- 2023-07-25
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 2021
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA
- Publication(s)
- Sunil Kumar Sahu, et al. Chromosome-scale genomes of commercial timber trees (Ochroma pyramidale, Mesuaferrea, and Tectona grandis). Scientific Data. 2023, 10.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOCN00000000 | - | Ochroma_pyramidale.contig.fasta.gz | Draft genome in contig level | 2023-07-25 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,840,885,147 |
| GC content | 35.56% |
| Contig sequence No. | 652 |
| Maximum contig sequence length (bp) | 104,788,770 |
| Minimum contig sequence length (bp) | 9,214 |
| Average contig sequence length (bp) | 2,823,443 |
| Contig N50 (bp) | 42,724,821 |
| Contig N90 (bp) | 15,975,981 |