- Scientific Name
- Ochroma pyramidale
- Common Names
- corkwood; balsa;
- Bioproject
- PRJCA017171
- Biosample
- SAMC1276182
- Accession No.
- GWHDOCO00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR795309, CRR795308, CRR795307, CRR795314, CRR795313, more
- GVM variations of the species
- -
- Submitter Organization
- plant genome, BGI
- Contact
- Liu Min, liumin4@genomics.cn
- Sequence author(s)
- Liu Min
- Released Date
- 2023-07-25
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- 3D-DNA 201008
- Sequencing & coverage
- Hi-C 98.0
- Download
- DNA
- Publication(s)
- Sunil Kumar Sahu, et al. Chromosome-scale genomes of commercial timber trees (Ochroma pyramidale, Mesuaferrea, and Tectona grandis). Scientific Data. 2023, 10.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOCO00000000 | - | Ochroma_pyramidale_hic.fasta.gz | Draft genome in scaffold level | 2023-07-25 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,794,081,084 |
| GC content | 35.26% |
| Scaffold sequence No. | 42 |
| Maximum scaffold sequence length (bp) | 138,460,876 |
| Minimum scaffold sequence length (bp) | 13,728,025 |
| Average scaffold sequence length (bp) | 42,716,216 |
| Scaffold N50 (bp) | 55,069,682 |
| Scaffold N90 (bp) | 21,874,534 |