- Scientific Name
- Actinidia eriantha
- Common Names
- -
- Bioproject
- PRJCA017919
- Biosample
- SAMC2820451
- Accession No.
- GWHDOCT00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Horticulture, Anhui Agricultural University
- Contact
- Yingzhen Wang, wangyingzhen91@163.com
- Sequence author(s)
- Yingzhen Wang
- Released Date
- 2023-06-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v1
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Yingzhen Wang. Telomere-to-telomere and haplotype-resolved genome of the kiwifruit Actinidia eriantha. Molecular Horticulture. 2023, 3: 4.
Statistics of Genome Assembly
| Genome size (bp) | 619,372,199 |
| GC content | 35.67% |
| Chromosomes sequence No. | 27 |
| Genome sequence No. | 29 |
| Maximum genome sequence length (bp) | 27,350,345 |
| Minimum genome sequence length (bp) | 15,637,950 |
| Average genome sequence length (bp) | 21,357,662 |
| Genome sequence N50 (bp) | 21,361,040 |
| Genome sequence N90 (bp) | 17,991,436 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 47,481 | 47,481 |
| Others | 3,537 | 3,537 |
| Total | 51,018 | 51,018 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,826 | 1,826 |
| chr10 | 1,696 | 1,696 |
| chr11 | 1,481 | 1,481 |
| chr12 | 1,657 | 1,657 |
| chr14 | 1,649 | 1,649 |
| chr15 | 1,672 | 1,672 |
| chr16 | 1,712 | 1,712 |
| chr17 | 1,591 | 1,591 |
| chr18 | 1,867 | 1,867 |
| chr19 | 2,117 | 2,117 |
| chr2 | 1,691 | 1,691 |
| chr20 | 1,779 | 1,779 |
| chr22 | 1,644 | 1,644 |
| chr23 | 2,227 | 2,227 |
| chr24 | 1,657 | 1,657 |
| chr25 | 1,572 | 1,572 |
| chr26 | 1,738 | 1,738 |
| chr27 | 1,679 | 1,679 |
| chr28 | 1,810 | 1,810 |
| chr29 | 1,571 | 1,571 |
| chr3 | 2,447 | 2,447 |
| chr4 | 1,261 | 1,261 |
| chr5 | 1,625 | 1,625 |
| chr6 | 1,876 | 1,876 |
| chr7 | 1,772 | 1,772 |
| chr8 | 2,332 | 2,332 |
| chr9 | 1,532 | 1,532 |
| Others | 3,537 | 3,537 |
| Total | 51,018 | 51,018 |