- Scientific Name
- Actinidia eriantha
- Common Names
- -
- Bioproject
- PRJCA017919
- Biosample
- SAMC2820451
- Accession No.
- GWHDOCU00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of Horticulture, Anhui Agricultural University
- Contact
- Yingzhen Wang, wangyingzhen91@163.com
- Sequence author(s)
- Yingzhen Wang
- Released Date
- 2023-06-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v1
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Yingzhen Wang. Telomere-to-telomere and haplotype-resolved genome of the kiwifruit Actinidia eriantha. Molecular Horticulture. 2023, 3: 4.
Statistics of Genome Assembly
| Genome size (bp) | 611,725,914 |
| GC content | 35.68% |
| Chromosomes sequence No. | 28 |
| Genome sequence No. | 29 |
| Maximum genome sequence length (bp) | 27,562,664 |
| Minimum genome sequence length (bp) | 15,616,416 |
| Average genome sequence length (bp) | 21,093,997 |
| Genome sequence N50 (bp) | 20,936,105 |
| Genome sequence N90 (bp) | 17,894,292 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 49,523 | 49,523 |
| Others | 1,599 | 1,599 |
| Total | 51,122 | 51,122 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,847 | 1,847 |
| chr10 | 1,685 | 1,685 |
| chr11 | 1,460 | 1,460 |
| chr12 | 1,668 | 1,668 |
| chr13 | 1,958 | 1,958 |
| chr14 | 1,639 | 1,639 |
| chr15 | 1,671 | 1,671 |
| chr16 | 1,648 | 1,648 |
| chr17 | 1,561 | 1,561 |
| chr18 | 1,927 | 1,927 |
| chr19 | 2,102 | 2,102 |
| chr2 | 1,648 | 1,648 |
| chr20 | 1,758 | 1,758 |
| chr22 | 1,611 | 1,611 |
| chr23 | 2,244 | 2,244 |
| chr24 | 1,638 | 1,638 |
| chr25 | 1,571 | 1,571 |
| chr26 | 1,710 | 1,710 |
| chr27 | 2,057 | 2,057 |
| chr28 | 1,730 | 1,730 |
| chr29 | 1,592 | 1,592 |
| chr3 | 2,525 | 2,525 |
| chr4 | 1,288 | 1,288 |
| chr5 | 1,595 | 1,595 |
| chr6 | 1,842 | 1,842 |
| chr7 | 1,757 | 1,757 |
| chr8 | 2,301 | 2,301 |
| chr9 | 1,490 | 1,490 |
| Others | 1,599 | 1,599 |
| Total | 51,122 | 51,122 |