- Scientific Name
- Enterobacter cloacae
- Common Names
- Aerobacter cloacae, Bacillus cloacae, Bacterium cloacae, Cloaca cloacae
- Bioproject
- PRJCA017599
- Biosample
- SAMC1308483
- Accession No.
- GWHDOEZ00000000
- GWH reannotation accession
- GWHRA_DOEZ00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Health Supervision and Surveillance, Chinese PLA Center for Disease Control and Prevention
- Contact
- Xiaofeng Hu, xiaofenghu1988@sohu.com
- Sequence author(s)
- Xiaofeng Hu
- Released Date
- 2023-07-10
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- SOAPdenovo v2.04
- Sequencing & coverage
- Illumina HiSeq 2500 100.0
- Download
- DNA Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOEZ00000000 | GWHRA_DOEZ00000000.1 | EcHK002 | Draft genome in scaffold level | 2023-07-10 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 5,284,340 |
| GC content | 54.86% |
| Scaffold sequence No. | 107 |
| Maximum scaffold sequence length (bp) | 688,175 |
| Minimum scaffold sequence length (bp) | 510 |
| Average scaffold sequence length (bp) | 49,386 |
| Scaffold N50 (bp) | 201,472 |
| Scaffold N90 (bp) | 37,116 |
Statistics of Genome Assembly
| Genome size (bp) | 5,284,340 |
| GC content | 54.86% |
| Scaffold sequence No. | 107 |
| Maximum scaffold sequence length (bp) | 688,175 |
| Minimum scaffold sequence length (bp) | 510 |
| Average scaffold sequence length (bp) | 49,386 |
| Scaffold N50 (bp) | 201,472 |
| Scaffold N90 (bp) | 37,116 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 5,010 | 74 | 2 | 1 | 102 | 126 | 5,315 |