- Scientific Name
- Solanum tuberosum
- Common Names
- potatoes; potato;
- Bioproject
- PRJCA014719
- Biosample
- SAMC1075593
- Accession No.
- GWHDOGV00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 48,728,403 (SNP), 3,352,602 (Indel)
- Submitter Organization
- -, Hunan Vegetable Research Institute, Hunan Academy of Agricultural Sciences
- Contact
- Lei GONG(tea_gl@126.com)
- Sequence author(s)
- Lei GONG
- Released Date
- 2023-07-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon v3.0.0
- Sequencing & coverage
- PacBio 99.09
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOGV00000000 | - | potato_haplotype1.genome.fasta.gz | Draft genome in chromosome level | 2023-07-12 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 825,831,319 |
| GC content | 34.93% |
| Chromosomes sequence No. | 12 |
| Genome sequence No. | 427 |
| Maximum genome sequence length (bp) | 94,854,612 |
| Minimum genome sequence length (bp) | 234 |
| Average genome sequence length (bp) | 1,934,031 |
| Genome sequence N50 (bp) | 61,783,597 |
| Genome sequence N90 (bp) | 53,534,819 |