- Scientific Name
- Panax quinquefolius
- Common Names
- Panax quinquefolium
- Bioproject
- PRJCA017442
- Biosample
- SAMC1287586
- Accession No.
- GWHDOGX00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- -, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences
- Contact
- Yuan Yuan(y_yuan0732@163.com)
- Sequence author(s)
- Zhengpeng Wang
- Released Date
- 2024-08-06
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon 2025-06-05
- Sequencing & coverage
- PacBio 151.76
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 4,509,272,518 |
| GC content | 34.67% |
| Chromosomes sequence No. | 24 |
| Genome sequence No. | 2,136 |
| Maximum genome sequence length (bp) | 244,851,967 |
| Minimum genome sequence length (bp) | 4,358 |
| Average genome sequence length (bp) | 2,111,083 |
| Genome sequence N50 (bp) | 187,931,504 |
| Genome sequence N90 (bp) | 146,028,653 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 68,365 | 68,365 |
| Others | 718 | 718 |
| Total | 69,083 | 69,083 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,713 | 3,713 |
| chr10 | 3,227 | 3,227 |
| chr11 | 2,916 | 2,916 |
| chr12 | 3,138 | 3,138 |
| chr13 | 2,512 | 2,512 |
| chr14 | 2,647 | 2,647 |
| chr15 | 2,724 | 2,724 |
| chr16 | 3,422 | 3,422 |
| chr17 | 2,482 | 2,482 |
| chr18 | 3,061 | 3,061 |
| chr19 | 3,085 | 3,085 |
| chr2 | 3,766 | 3,766 |
| chr20 | 2,280 | 2,280 |
| chr21 | 2,182 | 2,182 |
| chr22 | 2,036 | 2,036 |
| chr23 | 2,257 | 2,257 |
| chr24 | 2,384 | 2,384 |
| chr3 | 2,841 | 2,841 |
| chr4 | 2,701 | 2,701 |
| chr5 | 2,540 | 2,540 |
| chr6 | 2,804 | 2,804 |
| chr7 | 3,682 | 3,682 |
| chr8 | 2,429 | 2,429 |
| chr9 | 3,536 | 3,536 |
| Others | 718 | 718 |
| Total | 69,083 | 69,083 |