- Scientific Name
- Neisseria meningitidis
- Common Names
- Micrococcus meningitidis cerebrospinalis, Micrococcus meningitidis, Micrococcus intracellularis, Diplokokkus intracellularis meningitidis, Neisseria weichselbaumii
- Bioproject
- PRJCA018226
- Biosample
- SAMC2908706
- Accession No.
- GWHDOJD00000000
- GWH reannotation accession
- GWHRA_DOJD00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Suzhou Medical College, Soochow University
- Contact
- Ling Zhong(zhongling1211@foxmail.com)
- Sequence author(s)
- Ling Zhong
- Released Date
- 2023-07-13
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- EToKi assemble 1.0.0
- Sequencing & coverage
- Illumina HiSeq 4000 20
- Download
- DNA
- Reannotation Download
- Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOJD00000000 | GWHRA_DOJD00000000.1 | S89 | Draft genome in contig level | 2023-07-13 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,164,443 |
| GC content | 51.53% |
| Contig sequence No. | 179 |
| Maximum contig sequence length (bp) | 94,113 |
| Minimum contig sequence length (bp) | 305 |
| Average contig sequence length (bp) | 12,092 |
| Contig N50 (bp) | 39,602 |
| Contig N90 (bp) | 8,996 |
Statistics of Genome Assembly
| Genome size (bp) | 2,164,443 |
| GC content | 51.53% |
| Contig sequence No. | 179 |
| Maximum contig sequence length (bp) | 94,113 |
| Minimum contig sequence length (bp) | 305 |
| Average contig sequence length (bp) | 12,092 |
| Contig N50 (bp) | 39,602 |
| Contig N90 (bp) | 8,996 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2,018 | 54 | 3 | 1 | 163 | 189 | 2,428 |