- Scientific Name
- Neisseria meningitidis
- Common Names
- Micrococcus meningitidis cerebrospinalis, Micrococcus meningitidis, Micrococcus intracellularis, Diplokokkus intracellularis meningitidis, Neisseria weichselbaumii
- Bioproject
- PRJCA018226
- Biosample
- SAMC2908792
- Accession No.
- GWHDOML00000000
- GWH reannotation accession
- GWHRA_DOML00000000.1
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Suzhou Medical College, Soochow University
- Contact
- Ling Zhong(zhongling1211@foxmail.com)
- Sequence author(s)
- Ling Zhong
- Released Date
- 2023-07-13
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- EToKi assemble 1.0.0
- Sequencing & coverage
- Illumina HiSeq 4000 20
- Download
- DNA
- Reannotation Download
- Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDOML00000000 | GWHRA_DOML00000000.1 | HB024748 | Draft genome in contig level | 2023-07-13 |
DNA
Reannotation DNA Reannotation GFF Reannotation RNA Reannotation CDS Reannotation Protein |
Statistics of Genome Assembly
| Genome size (bp) | 2,474,104 |
| GC content | 51.21% |
| Contig sequence No. | 854 |
| Maximum contig sequence length (bp) | 106,967 |
| Minimum contig sequence length (bp) | 207 |
| Average contig sequence length (bp) | 2,897 |
| Contig N50 (bp) | 28,211 |
| Contig N90 (bp) | 594 |
Statistics of Genome Assembly
| Genome size (bp) | 2,474,104 |
| GC content | 51.21% |
| Contig sequence No. | 854 |
| Maximum contig sequence length (bp) | 106,967 |
| Minimum contig sequence length (bp) | 207 |
| Average contig sequence length (bp) | 2,897 |
| Contig N50 (bp) | 28,211 |
| Contig N90 (bp) | 594 |
Annotation of Whole Genome Assembly
| Protein | tRNA | rRNA | ncRNA | Pseudogene | Others | Total | |
|---|---|---|---|---|---|---|---|
| Total | 2,972 | 59 | 6 | 1 | 286 | 863 | 4,187 |