This is a new organism, provided by the submitter, which is not in the NCBI Taxonomy repository
- Scientific Name
- Blepharisma sp.3 P10K
- Common Names
- -
- Bioproject
- PRJCA017400
- Biosample
- SAMC2821049
- Accession No.
- GWHDQBO00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR889669
- GVM variations of the species
- -
- Submitter Organization
- Center for Molecular and Cellular Biology of Aquatic Organisms, Institute of Hydrobiology, Chinese Academy of Sciences
- Contact
- Kai Chen, chenkai@ihb.ac.cn
- Sequence author(s)
- Wei Miao
- Released Date
- 2023-09-18
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- Trinity v2.9.1
- Sequencing & coverage
- Illumina NovaSeq 6000 181
- Download
- DNA GFF RNA Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 22,572,493 |
| GC content | 32.00% |
| Contig sequence No. | 30,397 |
| Maximum contig sequence length (bp) | 9,710 |
| Minimum contig sequence length (bp) | 201 |
| Average contig sequence length (bp) | 743 |
| Contig N50 (bp) | 857 |
| Contig N90 (bp) | 409 |
Annotation of Whole Genome Assembly
| Protein | Pseudogene | Total | |
|---|---|---|---|
| Total | 2,790 | 27,607 | 30,397 |