Scientific Name
Lagerstroemia indica
Common Names
crape-myrtle, crepe myrtle, zi wei;
Bioproject
PRJCA013427
Biosample
SAMC1004445
Accession No.
GWHCAXI00000000
GWH reannotation accession
-
GSA raw reads
-
GVM variations of the species
-
Submitter Organization
School of Landscape Architecture, Beijing Forestry University
Contact
Yang Zhou, zoy0222@163.com
Sequence author(s)
Yang Zhou, Tangchun Zheng, Ming Cai, Huitang Pan, Tangren Cheng, Qixiang Zhang
Released Date
2023-07-25
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
SOAPdenovo 2020-09-07
Sequencing & coverage
PacBio 100.0
Download
DNA GFF RNA Protein
Publication(s)
Yang Zhou, et al. Genome assembly and resequencing analyses provide new insights into theevolution, domestication and ornamental traits of crape myrtle. Horticulture Research. 2023, 10(9).
Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHCAXI00000000 - v1 Draft genome in scaffold level 2023-07-25 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 329,140,768
GC content 38.86%
Chromosomes sequence No. 24
Genome sequence No. 32
Maximum genome sequence length (bp) 19,183,582
Minimum genome sequence length (bp) 11,473
Average genome sequence length (bp) 10,285,649
Genome sequence N50 (bp) 13,851,391
Genome sequence N90 (bp) 10,864,250
Annotation of Whole Genome Assembly
Protein Total
Chromosome 33,115 33,115
Others 2 2
Total 33,117 33,117
Annotation Details
ChrID Protein Total
chr1 1,382 1,382
chr10 1,358 1,358
chr11 1,407 1,407
chr12 1,268 1,268
chr13 1,255 1,255
chr14 1,370 1,370
chr15 1,165 1,165
chr16 1,465 1,465
chr17 1,257 1,257
chr18 1,276 1,276
chr19 1,121 1,121
chr2 1,941 1,941
chr20 1,060 1,060
chr21 1,028 1,028
chr22 1,103 1,103
chr23 864 864
chr24 933 933
chr3 1,733 1,733
chr4 1,745 1,745
chr5 1,666 1,666
chr6 1,709 1,709
chr7 1,608 1,608
chr8 1,733 1,733
chr9 1,668 1,668
Others 2 2
Total 33,117 33,117