Genome Warehouse

Scientific Name: Anas platyrhynchos
Common Names: duck, mallard duck, mallard ducks; mallard; Anas boschas, Anas domesticus, Anas platyrhynchos f. domestica
Bioproject: PRJCA001785
Biosample: SAMC109743
Accession No.: GWHAAZG00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: 8,342,394 (SNP), 1,509,678 (Indel)
Submitter Organization: Collage of Animal Science and Technology, Yangzhou University
Contact: Guobin Chang, gbchang@yzu.edu.cn
Sequence author(s): Guobin Chang
Released Date: 2021-09-09
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: SOAPdenovo 1.0
Sequencing & coverage: PacBio 252.24
Download: DNA GFF RNA Protein
Publication(s): Guobin Chang, et al. The First Crested Duck Genome Reveals Clues to Genetic Compensation and CrestCushion Formation. Genomics, Proteomics & Bioinformatics. 2023, 21(3): 483-500.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHAAZG00000000	-	Chinese crested duck_v1	Draft genome in scaffold level	2021-09-09	DNA GFF RNA Protein

Genome size (bp)	1,126,211,418
GC content	41.82%
Chromosomes sequence No.	38
Genome sequence No.	861
Maximum genome sequence length (bp)	195,240,008
Minimum genome sequence length (bp)	211
Average genome sequence length (bp)	1,308,027
Genome sequence N50 (bp)	73,735,783
Genome sequence N90 (bp)	7,382,291

Annotation of Whole Genome Assembly

Annotation Details