- Scientific Name
- Papaver somniferum
- Common Names
- opium poppy;
- Bioproject
- PRJCA018701
- Biosample
- SAMC2979105
- Accession No.
- GWHAZPJ00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Faculty of Electronic and Information Engineering, , Xi'an Jiaotong University
- Contact
- Xiaofei Yang, xfyang@xjtu.edu.cn
- Sequence author(s)
- Xiaofei Yang
- Released Date
- 2024-03-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.16.1
Shasta 0.10 - Sequencing & coverage
- PacBio 50.0
Oxford Nanopore 122.0 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHAZPJ00000000 | - | The improved chromosome-level assembly of P. somniferum | Draft genome in chromosome level | 2021-03-25 |
DNA
|
| GWHAZPJ00000000.1 | - | Pso_HiFi_v3 | Draft genome in chromosome level | 2024-03-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,786,512,425 |
| GC content | 37.35% |
| Chromosomes sequence No. | 11 |
| Genome sequence No. | 513 |
| Maximum genome sequence length (bp) | 344,816,055 |
| Minimum genome sequence length (bp) | 19,064 |
| Average genome sequence length (bp) | 5,431,798 |
| Genome sequence N50 (bp) | 261,977,153 |
| Genome sequence N90 (bp) | 186,096,664 |