- Scientific Name
- Penaeus japonicus
- Common Names
- Marsupenaeus japonicus, Penaeus (Marsupenaeus) japonicus, Penaeus (Melicertus) japonicus
- Bioproject
- PRJCA019896
- Biosample
- SAMC3068976
- Accession No.
- GWHDUDI00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- The Ocean and Earth Sciences, Xiamen University
- Contact
- Yiming Wei, 22320230156493@stu.xmu.edu.cn
- Sequence author(s)
- Yiming Wei, Yong Mao
- Released Date
- 2024-01-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- WTDBG Version: 2.5 (20190621)
- Sequencing & coverage
- PacBio 107.33
Illumina HiSeq 2000 115.43
HiC 113.4 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHDUDI00000000 | - | MjA | Draft genome in chromosome level | 2024-01-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,638,807,789 |
| GC content | 34.15% |
| Chromosomes sequence No. | 43 |
| Genome sequence No. | 2,381 |
| Maximum genome sequence length (bp) | 58,060,486 |
| Minimum genome sequence length (bp) | 2,109 |
| Average genome sequence length (bp) | 688,286 |
| Genome sequence N50 (bp) | 40,613,942 |
| Genome sequence N90 (bp) | 25,894,584 |