- Scientific Name
- Syzygium samarangense
- Common Names
- Java-apple, makopa, wax jambu;
- Bioproject
- PRJCA020366
- Biosample
- SAMC3096793
- Accession No.
- GWHDUEN00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Ocean Mega-Science, Yantai Institute of Coastal Zone Research and Center for Ocean Mega-Science, Chinese Academy of Sciences
- Contact
- Min Chen(15020818115@163.com)
- Sequence author(s)
- Min Chen
- Released Date
- 2023-10-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- allhic 2019-8-5
- Sequencing & coverage
- PacBio 110.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 408,522,733 |
| GC content | 41.00% |
| Chromosomes sequence No. | 1 |
| Genome sequence No. | 221 |
| Maximum genome sequence length (bp) | 45,784,741 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 1,848,519 |
| Genome sequence N50 (bp) | 40,129,571 |
| Genome sequence N90 (bp) | 31,209,524 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 3,897 | 3,897 |
| Others | 27,986 | 27,986 |
| Total | 31,883 | 31,883 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,897 | 3,897 |
| Others | 27,986 | 27,986 |
| Total | 31,883 | 31,883 |