- Scientific Name
- Syzygium samarangense
- Common Names
- Java-apple, makopa, wax jambu;
- Bioproject
- PRJCA020366
- Biosample
- SAMC3096805
- Accession No.
- GWHDVFZ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Ocean Mega-Science, Yantai Institute of Coastal Zone Research and Center for Ocean Mega-Science, Chinese Academy of Sciences
- Contact
- Min Chen(15020818115@163.com)
- Sequence author(s)
- Min Chen
- Released Date
- 2023-10-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Partial Genome ( Nuclear )
- Assembly method
- allhic 2019-8-5
- Sequencing & coverage
- PacBio 110.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 1,588,343,263 |
| GC content | 40.88% |
| Chromosomes sequence No. | 1 |
| Genome sequence No. | 2,769 |
| Maximum genome sequence length (bp) | 59,114,044 |
| Minimum genome sequence length (bp) | 1,000 |
| Average genome sequence length (bp) | 573,616 |
| Genome sequence N50 (bp) | 37,785,212 |
| Genome sequence N90 (bp) | 22,123,748 |
Annotation of Whole Genome Assembly
| Protein | Others | Total | |
|---|---|---|---|
| Chromosome | 1,437 | 0 | 1,437 |
| Others | 45,510 | 9 | 45,519 |
| Total | 46,947 | 9 | 46,956 |
Annotation Details
| ChrID | Protein | Others | Total |
|---|---|---|---|
| chr1 | 1,437 | 0 | 1,437 |
| Others | 45,510 | 9 | 45,519 |
| Total | 46,947 | 9 | 46,956 |