- Scientific Name
- ANME-2 cluster
- Common Names
- ANaerobic MEthanotrophs, ANME group
- Bioproject
- PRJCA001849
- Biosample
- SAMC111659
- Accession No.
- GWHABAM00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Biology and technology department, Shanghai Jiao Tong University
- Contact
- Shanshan Yang(1210882010@qq.com), Yongxin Lv(lvyongxin@sjtu.edu.cn)
- Sequence author(s)
- Shanshan Yang, Yongxin Lv
- Released Date
- 2023-05-05
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Partial Genome
- Assembly method
- SPAdes v.3.13.1
- Sequencing & coverage
- Illumina HiSeq X Ten 186.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHABAM00000000 | - | ANME_Origin.fa | Draft genome in scaffold level | 2023-05-05 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,972,237 |
| GC content | 43.31% |
| Scaffold sequence No. | 118 |
| Maximum scaffold sequence length (bp) | 135,131 |
| Minimum scaffold sequence length (bp) | 2,504 |
| Average scaffold sequence length (bp) | 25,188 |
| Scaffold N50 (bp) | 50,462 |
| Scaffold N90 (bp) | 11,941 |