- Scientific Name
- Cryptosporidium parvum
- Common Names
- -
- Bioproject
- PRJCA020540
- Biosample
- SAMC3115014
- Accession No.
- GWHEQBI00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- College of Veterinary Medicine, Henan Agricultural University
- Contact
- Longxian Zhang, zhanglx8999@henau.edu.cn
- Sequence author(s)
- Longxian Zhang
- Released Date
- 2023-12-04
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Nextdenovo v2.5.2
Canu v2.2.2 - Sequencing & coverage
- PacBio 386.0
ONT 967.0
MGI 173.0 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Yuancai Chen, et al. Chromosome-level genome assembly of Cryptosporidium parvum by long-read sequencing of ten oocysts. Scientific data. 2024, 11(1): 1287.
Statistics of Genome Assembly
| Genome size (bp) | 9,128,570 |
| GC content | 30.16% |
| Chromosomes sequence No. | 8 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 3,915 | 3,915 |
| Total | 3,915 | 3,915 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 398 | 398 |
| chr2 | 443 | 443 |
| chr3 | 444 | 444 |
| chr4 | 468 | 468 |
| chr5 | 461 | 461 |
| chr6 | 555 | 555 |
| chr7 | 586 | 586 |
| chr8 | 560 | 560 |
| Total | 3,915 | 3,915 |