- Scientific Name
- Epinephelus awoara
- Common Names
- yellow grouper; Serranus awoara
- Bioproject
- PRJCA020622
- Biosample
- SAMC3123263
- Accession No.
- GWHEQBJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- School of life sciences, Sun Yat-sen University
- Contact
- Weiwei Zhang(zhangww79@mail2.sysu.edu.cn)
- Sequence author(s)
- Weiwei Zhang
- Released Date
- 2023-10-21
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.19.4
- Sequencing & coverage
- PacBio 43.75
MGISEQ2000 111.71 - Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 984,482,722 |
| GC content | 41.35% |
| Chromosomes sequence No. | 24 |
| Genome sequence No. | 49 |
| Maximum genome sequence length (bp) | 48,783,561 |
| Minimum genome sequence length (bp) | 25,106 |
| Average genome sequence length (bp) | 20,091,484 |
| Genome sequence N50 (bp) | 41,385,296 |
| Genome sequence N90 (bp) | 35,383,561 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 24,243 | 24,243 |
| Others | 298 | 298 |
| Total | 24,541 | 24,541 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 987 | 987 |
| chr10 | 1,056 | 1,056 |
| chr11 | 989 | 989 |
| chr12 | 881 | 881 |
| chr13 | 1,122 | 1,122 |
| chr14 | 900 | 900 |
| chr15 | 892 | 892 |
| chr16 | 1,006 | 1,006 |
| chr17 | 1,053 | 1,053 |
| chr18 | 1,300 | 1,300 |
| chr19 | 894 | 894 |
| chr2 | 1,317 | 1,317 |
| chr20 | 947 | 947 |
| chr21 | 717 | 717 |
| chr22 | 863 | 863 |
| chr23 | 670 | 670 |
| chr24 | 658 | 658 |
| chr3 | 1,245 | 1,245 |
| chr4 | 1,013 | 1,013 |
| chr5 | 1,200 | 1,200 |
| chr6 | 970 | 970 |
| chr7 | 1,229 | 1,229 |
| chr8 | 1,151 | 1,151 |
| chr9 | 1,183 | 1,183 |
| Others | 298 | 298 |
| Total | 24,541 | 24,541 |