- Scientific Name
- Mangifera indica
- Common Names
- mango;
- Bioproject
- PRJCA020898
- Biosample
- SAMC3141886
- Accession No.
- GWHEQCT00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Crop Science, Queensland Alliance for Agriculture and Food Innovation, The University of Queensland
- Contact
- Upendra Wijesundara, w.wijesundara@uq.edu.au
- Sequence author(s)
- Upendra Wijesundara, Robert Henry, Agnelo Furtado, Natalie Dillon, Ardy Masouleh
- Released Date
- 2024-04-03
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFiasm 1
- Sequencing & coverage
- PacBio 204.0
- Download
- DNA GFF RNA Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 364,623,959 |
| GC content | 32.88% |
| Chromosomes sequence No. | 20 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 42,973 | 42,973 |
| Total | 42,973 | 42,973 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 3,308 | 3,308 |
| chr10 | 2,178 | 2,178 |
| chr11 | 2,197 | 2,197 |
| chr12 | 2,136 | 2,136 |
| chr13 | 1,720 | 1,720 |
| chr14 | 1,785 | 1,785 |
| chr15 | 1,545 | 1,545 |
| chr16 | 1,389 | 1,389 |
| chr17 | 1,543 | 1,543 |
| chr18 | 1,424 | 1,424 |
| chr19 | 1,512 | 1,512 |
| chr2 | 2,661 | 2,661 |
| chr20 | 1,244 | 1,244 |
| chr3 | 3,098 | 3,098 |
| chr4 | 2,804 | 2,804 |
| chr5 | 2,969 | 2,969 |
| chr6 | 2,132 | 2,132 |
| chr7 | 2,397 | 2,397 |
| chr8 | 2,625 | 2,625 |
| chr9 | 2,306 | 2,306 |
| Total | 42,973 | 42,973 |