- Scientific Name
- Suaeda glauca
- Common Names
- Suaeda asparagoides
- Bioproject
- PRJCA017004
- Biosample
- SAMC1255402
- Accession No.
- GWHEQCX00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR789675
- GVM variations of the species
- -
- Submitter Organization
- College of Plant protection, Fujian Agriculture and Forestry University
- Contact
- Cheng Yan, chengyan1220@hotmail.com
- Sequence author(s)
- Cheng Yan
- Released Date
- 2023-11-04
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- CANU 2.1.1
ALLHiC 0.9.8 - Sequencing & coverage
- Illumina HiSeq 2500 25.0
PacBio CLR 90.0 - Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Cheng Yan. A chromosome-level genome sequence of S. glauca provides new insights into the salt stress tolerance of halophytes.. Horticulture Research. 2023, 10(9): uhad161.
Statistics of Genome Assembly
| Genome size (bp) | 1,028,571,403 |
| GC content | 35.84% |
| Genome sequence No. | 569 |
| Maximum genome sequence length (bp) | 68,088,806 |
| Minimum genome sequence length (bp) | 202 |
| Average genome sequence length (bp) | 1,807,683 |
| Genome sequence N50 (bp) | 64,443,754 |
| Genome sequence N90 (bp) | 42,451,120 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 76,371 | 76,371 |