- Scientific Name
- Helianthus tuberosus
- Common Names
- Jerusalem artichoke;
- Bioproject
- PRJCA021065
- Biosample
- SAMC3157738
- Accession No.
- GWHEQHM00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- The Omics Technology Research Center, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences
- Contact
- Sen Wang, wangsen1993@163.com
- Sequence author(s)
- Sen Wang, Anqi Wang, Rong Chen, Dong Xu, Hengchao Wang, Fan Jiang, Hangwei Liu, Wanqiang Qian, Wei Fan
- Released Date
- 2023-11-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- HiFiasm 0.16.1-r375
- Sequencing & coverage
- PacBio 14.7
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 10,490,425,808 |
| GC content | 37.99% |
| Chromosomes sequence No. | 51 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 181,093 | 181,093 |
| Total | 181,093 | 181,093 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrA11 | 3,608 | 3,608 |
| chrA110 | 3,678 | 3,678 |
| chrA111 | 3,796 | 3,796 |
| chrA112 | 3,576 | 3,576 |
| chrA113 | 3,886 | 3,886 |
| chrA114 | 3,920 | 3,920 |
| chrA115 | 2,846 | 2,846 |
| chrA116 | 4,051 | 4,051 |
| chrA117 | 4,008 | 4,008 |
| chrA12 | 3,046 | 3,046 |
| chrA13 | 3,804 | 3,804 |
| chrA14 | 4,437 | 4,437 |
| chrA15 | 2,942 | 2,942 |
| chrA16 | 3,771 | 3,771 |
| chrA17 | 2,482 | 2,482 |
| chrA18 | 3,579 | 3,579 |
| chrA19 | 3,711 | 3,711 |
| chrA21 | 3,432 | 3,432 |
| chrA210 | 3,907 | 3,907 |
| chrA211 | 3,842 | 3,842 |
| chrA212 | 3,521 | 3,521 |
| chrA213 | 3,618 | 3,618 |
| chrA214 | 3,984 | 3,984 |
| chrA215 | 2,741 | 2,741 |
| chrA216 | 4,255 | 4,255 |
| chrA217 | 3,725 | 3,725 |
| chrA22 | 2,848 | 2,848 |
| chrA23 | 3,553 | 3,553 |
| chrA24 | 4,174 | 4,174 |
| chrA25 | 2,994 | 2,994 |
| chrA26 | 3,726 | 3,726 |
| chrA27 | 2,577 | 2,577 |
| chrA28 | 3,512 | 3,512 |
| chrA29 | 3,430 | 3,430 |
| chrB1 | 3,556 | 3,556 |
| chrB10 | 3,819 | 3,819 |
| chrB11 | 3,680 | 3,680 |
| chrB12 | 3,319 | 3,319 |
| chrB13 | 3,350 | 3,350 |
| chrB14 | 3,778 | 3,778 |
| chrB15 | 3,002 | 3,002 |
| chrB16 | 3,787 | 3,787 |
| chrB17 | 4,103 | 4,103 |
| chrB2 | 3,107 | 3,107 |
| chrB3 | 3,996 | 3,996 |
| chrB4 | 3,929 | 3,929 |
| chrB5 | 2,979 | 2,979 |
| chrB6 | 3,386 | 3,386 |
| chrB7 | 2,578 | 2,578 |
| chrB8 | 3,769 | 3,769 |
| chrB9 | 3,975 | 3,975 |
| Total | 181,093 | 181,093 |