- Scientific Name
- Ipomoea batatas
- Common Names
- batate; sweet potato; Ipomoea batatas var. edulis, Ipomoea tiliacea auct. non (Willd.) Choisy
- Bioproject
- PRJCA021337
- Biosample
- SAMC3172597
- Accession No.
- GWHEQIG00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 40,831,917 (SNP), 9,404,695 (Indel)
- Submitter Organization
- Tropical Crops Institute, Hainan University
- Contact
- Miaohua He(1321166588@qq.com)
- Sequence author(s)
- Long Zhao
- Released Date
- 2023-11-20
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm Hifiasm-0.16.1 (r375) 0.16.1 (r375)
- Sequencing & coverage
- PacBio 65.0
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHEQIG00000000 | - | sweetpotato.v1.asm.fa | Draft genome in chromosome level | 2023-11-20 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,828,308,674 |
| GC content | 36.48% |
| Genome sequence No. | 3,446 |
| Maximum genome sequence length (bp) | 40,351,435 |
| Minimum genome sequence length (bp) | 16,394 |
| Average genome sequence length (bp) | 820,751 |
| Genome sequence N50 (bp) | 29,219,552 |
| Genome sequence N90 (bp) | 21,207,621 |