- Scientific Name
- Barringtonia asiatica
- Common Names
- fish-poison-tree;
- Bioproject
- PRJCA020101
- Biosample
- SAMC3203685
- Accession No.
- GWHEQTY00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR961080
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Yulong Li, yl.lee2014@hotmail.com
- Sequence author(s)
- Ziwen He
- Released Date
- 2023-12-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- wtdbg2 2.5
- Sequencing & coverage
- PacBio 164.0
short-insert 55.0 - Download
-
DNA
- Publication(s)
- Yuan Wang, et al. The evolution history of an allotetraploid mangrove tree analysed with a new tool Allo4D. Plant Biotechnology Journal. 2023.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHEQTY00000000 | - | B.asiatica_assemble_v1 | Draft genome in scaffold level | 2023-12-08 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 787,469,813 |
| GC content | 37.14% |
| Scaffold sequence No. | 452 |
| Maximum scaffold sequence length (bp) | 28,310,629 |
| Minimum scaffold sequence length (bp) | 3,927 |
| Average scaffold sequence length (bp) | 1,742,190 |
| Scaffold N50 (bp) | 9,731,143 |
| Scaffold N90 (bp) | 2,087,718 |