- Scientific Name
- Barringtonia racemosa
- Common Names
- -
- Bioproject
- PRJCA020101
- Biosample
- SAMC3077674
- Accession No.
- GWHEQTZ00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR961079
- GVM variations of the species
- -
- Submitter Organization
- School of Life Sciences, Sun Yat-sen University
- Contact
- Yulong Li(yl.lee2014@hotmail.com)
- Sequence author(s)
- Ziwen He
- Released Date
- 2023-12-08
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- FALCON 2.2.4
- Sequencing & coverage
- PacBio 119.0
short-insert 73.0 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Yuan Wang, et al. The evolution history of an allotetraploid mangrove tree analysed with a new tool Allo4D. Plant Biotechnology Journal. 2023.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHEQTZ00000000 | - | B.racemosa_genome_v1 | Draft genome in scaffold level | 2023-12-08 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,263,220,466 |
| GC content | 37.10% |
| Scaffold sequence No. | 891 |
| Maximum scaffold sequence length (bp) | 40,410,423 |
| Minimum scaffold sequence length (bp) | 5,409 |
| Average scaffold sequence length (bp) | 1,417,756 |
| Scaffold N50 (bp) | 9,851,746 |
| Scaffold N90 (bp) | 2,122,932 |