- Scientific Name
- Brassica oleracea
- Common Names
- wild cabbage;
- Bioproject
- PRJCA020663
- Biosample
- SAMC3157536
- Accession No.
- GWHEQVE00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Bioinformatics, Smartgenomics Technology Institute
- Contact
- Ning Guo, guoning@nercv.org
- Sequence author(s)
- Ning Guo
- Released Date
- 2023-12-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.16.1
- Sequencing & coverage
- PacBio 45.41
- Download
-
DNA
GFF
RNA
Protein
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 606,364,932 |
| GC content | 37.15% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 10 |
| Maximum genome sequence length (bp) | 79,032,171 |
| Minimum genome sequence length (bp) | 978,592 |
| Average genome sequence length (bp) | 60,636,493 |
| Genome sequence N50 (bp) | 65,326,007 |
| Genome sequence N90 (bp) | 59,361,899 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 52,772 | 52,772 |
| Others | 156 | 156 |
| Total | 52,928 | 52,928 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrC1 | 4,927 | 4,927 |
| chrC2 | 5,174 | 5,174 |
| chrC3 | 7,514 | 7,514 |
| chrC4 | 6,030 | 6,030 |
| chrC5 | 6,109 | 6,109 |
| chrC6 | 4,161 | 4,161 |
| chrC7 | 5,393 | 5,393 |
| chrC8 | 6,082 | 6,082 |
| chrC9 | 7,382 | 7,382 |
| Others | 156 | 156 |
| Total | 52,928 | 52,928 |