- Scientific Name
- Brassica oleracea
- Common Names
- wild cabbage;
- Bioproject
- PRJCA020663
- Biosample
- SAMC3157531
- Accession No.
- GWHEQVL00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Bioinformatics, Smartgenomics Technology Institute
- Contact
- Ning Guo, guoning@nercv.org
- Sequence author(s)
- Ning Guo
- Released Date
- 2023-12-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.16.1
- Sequencing & coverage
- PacBio 43.15
- Download
-
DNA
GFF
RNA
Protein
- Publication(s) -
Statistics of Genome Assembly
| Genome size (bp) | 634,424,806 |
| GC content | 37.26% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 11 |
| Maximum genome sequence length (bp) | 86,880,579 |
| Minimum genome sequence length (bp) | 519,546 |
| Average genome sequence length (bp) | 57,674,982 |
| Genome sequence N50 (bp) | 72,197,880 |
| Genome sequence N90 (bp) | 53,632,606 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 51,586 | 51,586 |
| Others | 245 | 245 |
| Total | 51,831 | 51,831 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrC1 | 5,000 | 5,000 |
| chrC2 | 5,268 | 5,268 |
| chrC3 | 7,679 | 7,679 |
| chrC4 | 5,934 | 5,934 |
| chrC5 | 5,915 | 5,915 |
| chrC6 | 4,410 | 4,410 |
| chrC7 | 5,655 | 5,655 |
| chrC8 | 5,184 | 5,184 |
| chrC9 | 6,541 | 6,541 |
| Others | 245 | 245 |
| Total | 51,831 | 51,831 |