- Scientific Name
- Brassica oleracea
- Common Names
- wild cabbage;
- Bioproject
- PRJCA020663
- Biosample
- SAMC3157533
- Accession No.
- GWHEQVN00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Bioinformatics, Smartgenomics Technology Institute
- Contact
- Ning Guo, guoning@nercv.org
- Sequence author(s)
- Ning Guo
- Released Date
- 2023-12-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.16.1
- Sequencing & coverage
- PacBio 46.3
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 610,908,045 |
| GC content | 37.27% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 10 |
| Maximum genome sequence length (bp) | 81,976,334 |
| Minimum genome sequence length (bp) | 97,716 |
| Average genome sequence length (bp) | 61,090,805 |
| Genome sequence N50 (bp) | 69,094,299 |
| Genome sequence N90 (bp) | 58,704,059 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 52,202 | 52,202 |
| Others | 4 | 4 |
| Total | 52,206 | 52,206 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrC1 | 5,009 | 5,009 |
| chrC2 | 5,441 | 5,441 |
| chrC3 | 7,673 | 7,673 |
| chrC4 | 5,969 | 5,969 |
| chrC5 | 6,010 | 6,010 |
| chrC6 | 4,410 | 4,410 |
| chrC7 | 5,546 | 5,546 |
| chrC8 | 5,390 | 5,390 |
| chrC9 | 6,754 | 6,754 |
| Others | 4 | 4 |
| Total | 52,206 | 52,206 |