- Scientific Name
- Brassica oleracea
- Common Names
- wild cabbage;
- Bioproject
- PRJCA020663
- Biosample
- SAMC3157535
- Accession No.
- GWHEQVO00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Bioinformatics, Smartgenomics Technology Institute
- Contact
- Ning Guo, guoning@nercv.org
- Sequence author(s)
- Ning Guo
- Released Date
- 2023-12-28
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.16.1
- Sequencing & coverage
- PacBio 49.13
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 619,573,171 |
| GC content | 37.44% |
| Chromosomes sequence No. | 9 |
| Genome sequence No. | 11 |
| Maximum genome sequence length (bp) | 80,790,341 |
| Minimum genome sequence length (bp) | 22,959 |
| Average genome sequence length (bp) | 56,324,834 |
| Genome sequence N50 (bp) | 69,078,074 |
| Genome sequence N90 (bp) | 59,638,210 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 52,058 | 52,058 |
| Others | 1 | 1 |
| Total | 52,059 | 52,059 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chrC1 | 4,909 | 4,909 |
| chrC2 | 5,185 | 5,185 |
| chrC3 | 7,527 | 7,527 |
| chrC4 | 5,966 | 5,966 |
| chrC5 | 6,012 | 6,012 |
| chrC6 | 4,290 | 4,290 |
| chrC7 | 5,588 | 5,588 |
| chrC8 | 5,461 | 5,461 |
| chrC9 | 7,120 | 7,120 |
| Others | 1 | 1 |
| Total | 52,059 | 52,059 |