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  • Eleocharis dulcis
  • Ed1
    • Scientific Name
    Eleocharis dulcis
    Common Names
    Chinese water-chestnut; Eleocharis plantagineiformis
    Bioproject
    PRJCA018613
    Biosample
    SAMC3126015
    Accession No.
    GWHEQVU00000000
    GWH reannotation accession
    -
    GSA raw reads
    CRR922827
    GVM variations of the species
    -
    Submitter Organization
    Biodiversity Research Center, Wuhan Botanical Garden, Chinese Academy of Sciences
    Contact
    yan huang(huangyan22@mails.ucas.ac.cn)
    Sequence author(s)
    yan huang
    Released Date
    2024-04-16
    Assembly Level
    Draft genome in chromosome level
    Genome Representation
    Full Genome
    Assembly method
    HiFiasm v.0.16.0
    Sequencing & coverage
    PacBio 60.0
    Download
    DNA GFF RNA CDS Protein
    Reannotation Download
    -
    Publication(s)
    Yang Chen, et al. Telomere-to-telomere genome assembly of Eleocharis dulcis and expression profiles during corm development. Scientific data. 2024, 11(1): 869.
    Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
    GWHEQVU00000000 - Ed1 Draft genome in chromosome level 2024-04-16 DNA GFF RNA CDS Protein

    Statistics of Genome Assembly

    Genome size (bp) 493,271,381
    GC content 33.74%
    Chromosomes sequence No. 111
    Annotation of Whole Genome Assembly
    Protein Total
    Chromosome 33,493 33,493
    Total 33,493 33,493
    Annotation Details
    ChrID Protein Total
    chr1 492 492
    chr10 338 338
    chr100 220 220
    chr101 252 252
    chr102 195 195
    chr103 212 212
    chr104 213 213
    chr105 193 193
    chr106 200 200
    chr107 183 183
    chr108 197 197
    chr109 151 151
    chr11 379 379
    chr110 191 191
    chr111 195 195
    chr12 467 467
    chr13 392 392
    chr14 376 376
    chr15 360 360
    chr16 410 410
    chr17 284 284
    chr18 433 433
    chr19 386 386
    chr2 693 693
    chr20 345 345
    chr21 334 334
    chr22 377 377
    chr23 349 349
    chr24 378 378
    chr25 426 426
    chr26 439 439
    chr27 339 339
    chr28 394 394
    chr29 340 340
    chr3 519 519
    chr30 411 411
    chr31 340 340
    chr32 308 308
    chr33 398 398
    chr34 294 294
    chr35 300 300
    chr36 356 356
    chr37 325 325
    chr38 343 343
    chr39 284 284
    chr4 301 301
    chr40 330 330
    chr41 327 327
    chr42 229 229
    chr43 342 342
    chr44 334 334
    chr45 278 278
    chr46 336 336
    chr47 295 295
    chr48 319 319
    chr49 278 278
    chr5 557 557
    chr50 350 350
    chr51 275 275
    chr52 209 209
    chr53 235 235
    chr54 296 296
    chr55 233 233
    chr56 240 240
    chr57 268 268
    chr58 231 231
    chr59 233 233
    chr6 370 370
    chr60 311 311
    chr61 249 249
    chr62 290 290
    chr63 293 293
    chr64 249 249
    chr65 247 247
    chr66 306 306
    chr67 270 270
    chr68 313 313
    chr69 304 304
    chr7 435 435
    chr70 234 234
    chr71 294 294
    chr72 283 283
    chr73 268 268
    chr74 304 304
    chr75 267 267
    chr76 248 248
    chr77 269 269
    chr78 243 243
    chr79 262 262
    chr8 445 445
    chr80 266 266
    chr81 213 213
    chr82 254 254
    chr83 402 402
    chr84 294 294
    chr85 244 244
    chr86 256 256
    chr87 189 189
    chr88 267 267
    chr89 236 236
    chr9 458 458
    chr90 204 204
    chr91 194 194
    chr92 192 192
    chr93 280 280
    chr94 241 241
    chr95 228 228
    chr96 203 203
    chr97 235 235
    chr98 230 230
    chr99 146 146
    Total 33,493 33,493