- Scientific Name
- Cinnamomum chago
- Common Names
- Cinnamomum chaogo
- Bioproject
- PRJCA022354
- Biosample
- SAMC3278078
- Accession No.
- GWHERBI00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR1001225
- GVM variations of the species
- -
- Submitter Organization
- Yunnan Key Laboratory for Integrative Conservation of Plant Species with Extremely Small Populations, Kunming Institute of Botany, Chinese Academy of Sciences
- Contact
- Lidan Tao, taolidan@mail.kib.ac.cn
- Sequence author(s)
- Lidan Tao, Shiwei Guo, Zizhu Xiong, Weibang Sun
- Released Date
- 2024-01-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm hifiasm
- Sequencing & coverage
- PacBio 80.0
- Download
- DNA
- Publication(s)
- Lidan Tao, et al. Chromosome-level genome assembly of the threatened resource plant Cinnamomum chago. Scientific data. 2024, 11(1): 447.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHERBI00000000 | - | CCv1 | Draft genome in chromosome level | 2024-01-10 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,061,147,747 |
| GC content | 39.36% |
| Chromosomes sequence No. | 11 |
| Organellas sequence No. | 1 |
| Genome sequence No. | 14 |
| Maximum genome sequence length (bp) | 134,349,014 |
| Minimum genome sequence length (bp) | 152,753 |
| Average genome sequence length (bp) | 75,796,268 |
| Genome sequence N50 (bp) | 92,102,069 |
| Genome sequence N90 (bp) | 64,088,380 |