- Scientific Name
- Citrus reticulata
- Common Names
- mandarin orange, tangerine; Citrus poonensis
- Bioproject
- PRJCA022822
- Biosample
- SAMC3309001
- Accession No.
- GWHERCA00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR1011195
- GVM variations of the species
- -
- Submitter Organization
- National Key laboratory for Germplasm Innovation & Utilization of Horticultural Crops, Huazhong Agricultural University
- Contact
- Liu shengjun, shengjun0724@163.com
- Sequence author(s)
- Liu shengjun
- Released Date
- 2025-01-07
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.16.1
3d-dna pipeline v180922 - Sequencing & coverage
- HiFi 102.91
Hic 95.53 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHERCA00000000 | - | WZMG | Draft genome in chromosome level | 2025-01-07 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 346,627,640 |
| GC content | 37.43% |
| Chromosomes sequence No. | 8 |
| Genome sequence No. | 345 |
| Maximum genome sequence length (bp) | 48,045,000 |
| Minimum genome sequence length (bp) | 30,000 |
| Average genome sequence length (bp) | 1,004,718 |
| Genome sequence N50 (bp) | 31,651,000 |
| Genome sequence N90 (bp) | 1,497,000 |