- Scientific Name
- Lactuca sativa
- Common Names
- cultivated lettuce; garden lettuce;
- Bioproject
- PRJCA021111
- Biosample
- SAMC3170905
- Accession No.
- GWHEQHY00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR946351
- GVM variations of the species
- -
- Submitter Organization
- Temasek Life Sciences Laboratory, National University of Singapore
- Contact
- Shuai Cao, caos135@nenu.edu.cn
- Sequence author(s)
- Shuai Cao
- Released Date
- 2024-12-12
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.5
flye 2.9.2 - Sequencing & coverage
- PacBio 30.0
Oxford Nanopore technology 30.0 - Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHEQHY00000000 | - | cuttinglettucev01 | Draft genome in chromosome level | 2024-12-12 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,580,598,614 |
| GC content | 37.91% |
| Chromosomes sequence No. | 8 |
| Genome sequence No. | 9 |
| Maximum genome sequence length (bp) | 408,463,181 |
| Minimum genome sequence length (bp) | 206,590,668 |
| Average genome sequence length (bp) | 286,733,179 |
| Genome sequence N50 (bp) | 320,995,264 |
| Genome sequence N90 (bp) | 208,637,244 |