- Scientific Name
- Lactuca sativa
- Common Names
- cultivated lettuce; garden lettuce;
- Bioproject
- PRJCA023446
- Biosample
- SAMC3365671
- Accession No.
- GWHERDP00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Beijing Vegetable Research Center, Beijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Sciences
- Contact
- Bin Zhang, zhangbin@nercv.org
- Sequence author(s)
- Bin Zhang
- Released Date
- 2025-02-08
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm v0.19 Hifiasm v0.19
- Sequencing & coverage
- PacBio 46.0
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 2,590,532,713 |
| GC content | 37.96% |
| Chromosomes sequence No. | 1 |
| Genome sequence No. | 92 |
| Maximum genome sequence length (bp) | 407,152,762 |
| Minimum genome sequence length (bp) | 13,421 |
| Average genome sequence length (bp) | 28,157,964 |
| Genome sequence N50 (bp) | 320,389,343 |
| Genome sequence N90 (bp) | 213,756,765 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 3,545 | 3,545 |
| Others | 37,780 | 37,780 |
| Total | 41,325 | 41,325 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr6 | 3,545 | 3,545 |
| Others | 37,780 | 37,780 |
| Total | 41,325 | 41,325 |