Scientific Name
Lactuca sativa
Common Names
cultivated lettuce; garden lettuce;
Bioproject
PRJCA023446
Biosample
SAMC3365671
Accession No.
GWHERDY00000000
GWH reannotation accession
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GSA raw reads
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GVM variations of the species
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Submitter Organization
Beijing Vegetable Research Center, Beijing Vegetable Research Center, Beijing Academy of Agriculture and Forestry Sciences
Contact
Bin Zhang, zhangbin@nercv.org
Sequence author(s)
Bin Zhang
Released Date
2024-03-14
Assembly Level
Draft genome in chromosome level
Genome Representation
Full Genome
Assembly method
Hifiasm v0.19 Hifiasm v0.19
Sequencing & coverage
PacBio 46.0
Download
DNA GFF RNA Protein
Publication(s)
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Assembly Accession GWH Reannotation Accession Assembly Name Assembly Level Released Date Download Files
GWHERDY00000000 - Looseleaf lettuce Genome Assembly v1.2 Draft genome in scaffold level 2024-03-14 DNA GFF RNA Protein

Statistics of Genome Assembly

Genome size (bp) 2,590,683,526
GC content 37.96%
Chromosomes sequence No. 1
Genome sequence No. 77
Maximum genome sequence length (bp) 407,155,707
Minimum genome sequence length (bp) 23,638
Average genome sequence length (bp) 33,645,241
Genome sequence N50 (bp) 320,756,150
Genome sequence N90 (bp) 213,762,666
Annotation of Whole Genome Assembly
Protein Total
Chromosome 3,543 3,543
Others 37,727 37,727
Total 41,270 41,270
Annotation Details
ChrID Protein Total
chr6 3,543 3,543
Others 37,727 37,727
Total 41,270 41,270