- Scientific Name
- Kandelia obovata
- Common Names
- -
- Bioproject
- PRJCA023829
- Biosample
- SAMC3406141
- Accession No.
- GWHERFW00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR1073036
- GVM variations of the species
- -
- Submitter Organization
- college of the environment and ecoclogy university, Xiamen University
- Contact
- Yingjia Shen(shenyj@xmu.edu.cn)
- Sequence author(s)
- Yingjia Shen
- Released Date
- 2025-02-10
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Hifiasm 0.19.6-r595
Allhic 0.9.13 - Sequencing & coverage
- PacBio 45.15
Illumina HiSeq 2000 59.33 - Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHERFW00000000 | - | Genome Assembly of Kandelia obovata | Draft genome in chromosome level | 2025-02-10 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 197,688,791 |
| GC content | 35.49% |
| Chromosomes sequence No. | 18 |
| Genome sequence No. | 276 |
| Maximum genome sequence length (bp) | 15,125,034 |
| Minimum genome sequence length (bp) | 11,879 |
| Average genome sequence length (bp) | 716,264 |
| Genome sequence N50 (bp) | 10,209,151 |
| Genome sequence N90 (bp) | 7,326,063 |