- Scientific Name
- Manihot esculenta
- Common Names
- manioc, tapioca, yuca; cassava; Manihot utilissima
- Bioproject
- PRJCA007668
- Biosample
- SAMC3429849
- Accession No.
- GWHERLH00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 27,032,954 (SNP), 4,872,533 (Indel)
- Submitter Organization
- Hainan university, Hainan University
- Contact
- Yuting Bao(337875260@qq.com)
- Sequence author(s)
- Yuting Bao
- Released Date
- 2024-12-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Nextdenovo v2.0-beta.1
- Sequencing & coverage
- Nanopore 136X
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHERLH00000000 | - | a4041_raname.fasta | Draft genome in chromosome level | 2024-12-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 705,576,327 |
| GC content | 37.09% |
| Chromosomes sequence No. | 18 |
| Genome sequence No. | 529 |
| Maximum genome sequence length (bp) | 45,110,291 |
| Minimum genome sequence length (bp) | 10,930 |
| Average genome sequence length (bp) | 1,333,793 |
| Genome sequence N50 (bp) | 36,809,481 |
| Genome sequence N90 (bp) | 30,412,083 |