- Scientific Name
- Manihot esculenta
- Common Names
- manioc, tapioca, yuca; cassava; Manihot utilissima
- Bioproject
- PRJCA007668
- Biosample
- SAMC3429847
- Accession No.
- GWHERLJ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 27,032,954 (SNP), 4,872,533 (Indel)
- Submitter Organization
- Hainan university, Hainan University
- Contact
- Yuting Bao(337875260@qq.com)
- Sequence author(s)
- Yuting Bao
- Released Date
- 2024-10-30
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Nextdenovo v2.0-beta.1
- Sequencing & coverage
- Nanopore 130X
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHERLJ00000000 | - | a4160_rename.fasta | Draft genome in chromosome level | 2024-10-30 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 605,098,946 |
| GC content | 36.63% |
| Chromosomes sequence No. | 18 |
| Genome sequence No. | 247 |
| Maximum genome sequence length (bp) | 40,261,110 |
| Minimum genome sequence length (bp) | 10,967 |
| Average genome sequence length (bp) | 2,449,793 |
| Genome sequence N50 (bp) | 32,892,349 |
| Genome sequence N90 (bp) | 25,136,623 |