Genome Warehouse

Scientific Name: Malus spectabilis
Common Names: Chinese flowering crabapple;
Bioproject: PRJCA015452
Biosample: SAMC1150994
Accession No.: GWHCAXH00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: Institute for Horticultural Plants, China Agricultural University
Contact: Wei Li, liwei0522898@163.com
Sequence author(s): Wei Li, Chong Chu, Taikui Zhang, Haochen Sun, Shiyao Wang, Zeyuan Liu, Zijun Wang, Zhenhai Han
Released Date: 2025-02-10
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: hifiasm v0.15.2_r334
Sequencing & coverage: PacBio 44.39
Download: DNA GFF RNA CDS Protein
Publication(s): Wei Li, et al. Pan-genome analysis reveals the evolution and diversity of Malus. Nature Genetics. 2025, 57(5): 1274-1286.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHCAXH00000000	-	Malus spectabilis haploid consensus genome	Draft genome in chromosome level	2025-02-10	DNA GFF RNA CDS Protein

Genome size (bp)	708,058,280
GC content	38.30%
Chromosomes sequence No.	17
Genome sequence No.	54
Maximum genome sequence length (bp)	55,080,405
Minimum genome sequence length (bp)	25,000
Average genome sequence length (bp)	13,112,190
Genome sequence N50 (bp)	36,115,322
Genome sequence N90 (bp)	30,699,920

Annotation of Whole Genome Assembly

Annotation Details