Genome Warehouse

Scientific Name: Malus fusca
Common Names: Oregon crabapple;
Bioproject: PRJCA015452
Biosample: SAMC1150991
Accession No.: GWHCAXU00000000
GWH reannotation accession: -
GSA raw reads: -
GVM variations of the species: -
Submitter Organization: Institute for Horticultural Plants, China Agricultural University
Contact: Wei Li, liwei0522898@163.com
Sequence author(s): Wei Li, Chong Chu, Taikui Zhang, Haochen Sun, Shiyao Wang, Zeyuan Liu, Zijun Wang, Zhenhai Han
Released Date: 2025-02-10
Assembly Level: Draft genome in chromosome level
Genome Representation: Full Genome
Assembly method: hifiasm v0.15.2_r334
Sequencing & coverage: PacBio 41.38
Download: DNA GFF RNA CDS Protein
Publication(s): Wei Li, et al. Pan-genome analysis reveals the evolution and diversity of Malus. Nature Genetics. 2025, 57(5): 1274-1286.

Assembly Accession	GWH Reannotation Accession	Assembly Name	Assembly Level	Released Date	Download Files
GWHCAXU00000000	-	Malus fusca haploid consensus genome	Draft genome in chromosome level	2025-02-10	DNA GFF RNA CDS Protein

Genome size (bp)	687,141,161
GC content	38.30%
Chromosomes sequence No.	17
Genome sequence No.	49
Maximum genome sequence length (bp)	54,133,000
Minimum genome sequence length (bp)	1,000
Average genome sequence length (bp)	14,023,289
Genome sequence N50 (bp)	36,206,951
Genome sequence N90 (bp)	30,703,659

Annotation of Whole Genome Assembly

Annotation Details