- Scientific Name
- Citrus reticulata
- Common Names
- mandarin orange, tangerine; Citrus poonensis
- Bioproject
- PRJCA024652
- Biosample
- SAMC3478879
- Accession No.
- GWHERPZ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- BGI-research, BGI
- Contact
- Yayu Wang, wangyayu@genomics.cn
- Sequence author(s)
- Yayu Wang
- Released Date
- 2024-04-03
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- Nextdenovo v2.2 beta.0
- Sequencing & coverage
- Oxford Nanopore 100.0
- Download
- DNA
- Publication(s)
- Jiawen Wen, et al. An integrated multi-omics approach reveals polymethoxylated flavonoid biosynthesis in Citrus reticulata cv. Chachiensis. Nature communications. 2024, 15(1): 3991.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHERPZ00000000 | - | Citrus reticulata | Draft genome in scaffold level | 2024-04-03 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 314,958,732 |
| GC content | 34.33% |
| Scaffold sequence No. | 39 |
| Maximum scaffold sequence length (bp) | 31,243,079 |
| Minimum scaffold sequence length (bp) | 103,333 |
| Average scaffold sequence length (bp) | 8,075,865 |
| Scaffold N50 (bp) | 20,331,149 |
| Scaffold N90 (bp) | 6,701,005 |