- Scientific Name
- Misgurnus anguillicaudatus
- Common Names
- dojo loach, golden dojo loach, Japanese weatherfish, oriental weatherloach, weather loach; oriental weatherfish; Cobitis anguillicaudata
- Bioproject
- PRJCA024744
- Biosample
- SAMC3481758
- Accession No.
- GWHERQD00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Huazhong Agricultural University, Huazhong Agricultural University
- Contact
- bing sun(1032696852@qq.com)
- Sequence author(s)
- bing sun
- Released Date
- 2024-04-03
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm hifiasm 0.16.1
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 1,106,857,305 |
| GC content | 38.10% |
| Chromosomes sequence No. | 25 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 24,398 | 24,398 |
| Total | 24,398 | 24,398 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,381 | 1,381 |
| chr10 | 1,181 | 1,181 |
| chr11 | 959 | 959 |
| chr12 | 960 | 960 |
| chr13 | 1,074 | 1,074 |
| chr14 | 889 | 889 |
| chr15 | 836 | 836 |
| chr16 | 766 | 766 |
| chr17 | 919 | 919 |
| chr18 | 795 | 795 |
| chr19 | 936 | 936 |
| chr2 | 1,338 | 1,338 |
| chr20 | 933 | 933 |
| chr21 | 820 | 820 |
| chr22 | 757 | 757 |
| chr23 | 919 | 919 |
| chr24 | 849 | 849 |
| chr25 | 725 | 725 |
| chr3 | 1,266 | 1,266 |
| chr4 | 1,080 | 1,080 |
| chr5 | 1,184 | 1,184 |
| chr6 | 991 | 991 |
| chr7 | 915 | 915 |
| chr8 | 1,065 | 1,065 |
| chr9 | 860 | 860 |
| Total | 24,398 | 24,398 |