- Scientific Name
- Misgurnus anguillicaudatus
- Common Names
- dojo loach, golden dojo loach, Japanese weatherfish, oriental weatherloach, weather loach; oriental weatherfish; Cobitis anguillicaudata
- Bioproject
- PRJCA024744
- Biosample
- SAMC3481758
- Accession No.
- GWHERQE00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Huazhong Agricultural University, Huazhong Agricultural University
- Contact
- bing sun(1032696852@qq.com)
- Sequence author(s)
- bing sun
- Released Date
- 2024-04-03
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm Hifiasm 0.16.1
- Sequencing & coverage
- PacBio 30.0
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 1,101,256,211 |
| GC content | 38.10% |
| Chromosomes sequence No. | 25 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 24,541 | 24,541 |
| Total | 24,541 | 24,541 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 1,360 | 1,360 |
| chr10 | 1,177 | 1,177 |
| chr11 | 939 | 939 |
| chr12 | 958 | 958 |
| chr13 | 1,053 | 1,053 |
| chr14 | 872 | 872 |
| chr15 | 860 | 860 |
| chr16 | 843 | 843 |
| chr17 | 933 | 933 |
| chr18 | 802 | 802 |
| chr19 | 941 | 941 |
| chr2 | 1,345 | 1,345 |
| chr20 | 965 | 965 |
| chr21 | 849 | 849 |
| chr22 | 768 | 768 |
| chr23 | 936 | 936 |
| chr24 | 842 | 842 |
| chr25 | 720 | 720 |
| chr3 | 1,277 | 1,277 |
| chr4 | 1,069 | 1,069 |
| chr5 | 1,196 | 1,196 |
| chr6 | 959 | 959 |
| chr7 | 925 | 925 |
| chr8 | 1,065 | 1,065 |
| chr9 | 887 | 887 |
| Total | 24,541 | 24,541 |