- Scientific Name
- Malus melliana
- Common Names
- -
- Bioproject
- PRJCA015452
- Biosample
- SAMC1150993
- Accession No.
- GWHCBDZ00000000
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Institute for Horticultural Plants, China Agricultural University
- Contact
- Wei Li(liwei0522898@163.com), Haochen Sun(fei_chen980615@163.com)
- Sequence author(s)
- Wei Li, Chong Chu, Taikui Zhang, Haochen Sun, Shiyao Wang, Zeyuan Liu, Zijun Wang, Zhenhai Han
- Released Date
- 2025-02-10
- Assembly Level
- Draft genome in contig level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.15.2_r334
- Sequencing & coverage
- PacBio 37.06
- Download
- DNA GFF RNA CDS Protein
- Reannotation Download
- -
- Publication(s)
- Wei Li, et al. Pan-genome analysis reveals the evolution and diversity of Malus. Nature Genetics. 2025, 57(5): 1274-1286.
Statistics of Genome Assembly
| Genome size (bp) | 677,225,751 |
| GC content | 38.30% |
| Contig sequence No. | 824 |
| Maximum contig sequence length (bp) | 46,965,120 |
| Minimum contig sequence length (bp) | 10,754 |
| Average contig sequence length (bp) | 821,876 |
| Contig N50 (bp) | 17,538,695 |
| Contig N90 (bp) | 3,905,096 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Total | 48,578 | 48,578 |