- Scientific Name
- Sus scrofa
- Common Names
- pigs, swine, wild boar; pig;
- Bioproject
- PRJCA024381
- Biosample
- SAMC3464173
- Accession No.
- GWHESQV00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR1088118
- GVM variations of the species
- 90,901,492 (SNP), 12,087,428 (Indel)
- Submitter Organization
- College of Animal Science and Technology, China Agricultural University
- Contact
- Heng Du, kimi-du@cau.edu.cn
- Sequence author(s)
- Jian-Feng Liu
- Released Date
- 2024-08-27
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon Falcon (v2018.03.12)
- Sequencing & coverage
- PacBio 79.11
- Download
- DNA
- Publication(s)
- -
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHESQV00000000 | - | CAU-Huai | Draft genome in chromosome level | 2024-08-27 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 2,541,063,731 |
| GC content | 42.04% |
| Chromosomes sequence No. | 20 |
| Organellas sequence No. | 1 |
| Genome sequence No. | 1,365 |
| Maximum genome sequence length (bp) | 276,080,561 |
| Minimum genome sequence length (bp) | 10,351 |
| Average genome sequence length (bp) | 1,861,585 |
| Genome sequence N50 (bp) | 138,919,861 |
| Genome sequence N90 (bp) | 67,740,165 |