- Scientific Name
- Sorghum bicolor
- Common Names
- broomcorn, milo; sorghum; Andropogon sorghum, Sorghum bicolor subsp. bicolor, Sorghum nervosum, Sorghum saccharatum, Sorghum vulgare
- Bioproject
- PRJCA026490
- Biosample
- SAMC3759316
- Accession No.
- GWHESWV00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 60,024,602 (SNP), 9,992,120 (Indel)
- Submitter Organization
- State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Sichuan Agricultural University
- Contact
- Jiwei Zhang, zhangjiwei@sicau.edu.cn
- Sequence author(s)
- Jiwei Zhang
- Released Date
- 2024-06-11
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Mecat2 v1
- Sequencing & coverage
- PacBio Sequel 175
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- Jiwei Zhang, et al. Comparative genomic analysis reveals the difference of NLR immune receptors between anthracnose-resistant and susceptible sorghum cultivars. Phytopathology Research. 2025, 7.
Statistics of Genome Assembly
| Genome size (bp) | 716,657,873 |
| GC content | 43.86% |
| Chromosomes sequence No. | 10 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 48,935 | 48,935 |
| Total | 48,935 | 48,935 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 8,332 | 8,332 |
| chr10 | 4,346 | 4,346 |
| chr2 | 6,257 | 6,257 |
| chr3 | 6,845 | 6,845 |
| chr4 | 5,463 | 5,463 |
| chr5 | 3,237 | 3,237 |
| chr6 | 4,195 | 4,195 |
| chr7 | 3,476 | 3,476 |
| chr8 | 2,926 | 2,926 |
| chr9 | 3,858 | 3,858 |
| Total | 48,935 | 48,935 |