- Scientific Name
- Hevea brasiliensis
- Common Names
- jebe, Para rubber tree, siringa; rubber tree;
- Bioproject
- PRJCA001891
- Biosample
- SAMC113597
- Accession No.
- GWHABGM00000000
- GWH reannotation accession
- -
- GSA raw reads
- CRR084726
- GVM variations of the species
- 9,584,819 (SNP), - (Indel)
- Submitter Organization
- college of agriculture, South China Agricultural University
- Contact
- Wei Li, liweisdau@126.com
- Sequence author(s)
- Wei Li
- Released Date
- 2020-02-01
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- Falcon 0.0.6
- Sequencing & coverage
- PacBio 100.0
- Download
- DNA
- Publication(s)
- Jin Liu, et al. The Chromosome-based Rubber Tree Genome Provides New Insights into Spurge Genome Evolution and Rubber Biosynthesis. Molecular Plant. 2019.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHABGM00000000 | - | rubber | Draft genome in chromosome level | 2020-02-01 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,473,451,759 |
| GC content | 33.87% |
| Chromosomes sequence No. | 18 |
| Genome sequence No. | 600 |
| Maximum genome sequence length (bp) | 103,982,110 |
| Minimum genome sequence length (bp) | 2,887 |
| Average genome sequence length (bp) | 2,455,753 |
| Genome sequence N50 (bp) | 87,430,961 |
| Genome sequence N90 (bp) | 49,052,873 |