- Scientific Name
- Fulvetta ruficapilla
- Common Names
- Alcippe ruficapilla, Siva ruficapilla
- Bioproject
- PRJCA027142
- Biosample
- SAMC3834145
- Accession No.
- GWHETLV00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- CRR1203752
- GVM variations of the species
- -
- Submitter Organization
- State Key Laboratory of Genetic Resources and Evolution, Kunming Institute of Zoology, Chinese Academy of Sciences
- Contact
- Chen Yan(yanchen@mail.kiz.ac.cn)
- Sequence author(s)
- Chen Yan
- Released Date
- 2024-08-10
- Assembly Level
- Draft genome in scaffold level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm 0.19.8
YaHS 1.1 - Sequencing & coverage
- PacBio HiFi 32
- Download
- DNA
- Reannotation Download
- -
- Publication(s)
- Chen Yan, et al. A high-quality genome assembly of the Spectacled Fulvetta (Fulvetta ruficapilla) endemic to China. Scientific data. 2024, 11(1): 1252.
| Assembly Accession | GWH Reannotation Accession | Assembly Name | Assembly Level | Released Date | Download Files |
|---|---|---|---|---|---|
| GWHETLV00000000.1 | - | Fruf_v1 | Draft genome in scaffold level | 2024-08-10 |
DNA
|
Statistics of Genome Assembly
| Genome size (bp) | 1,208,308,458 |
| GC content | 43.04% |
| Scaffold sequence No. | 504 |
| Maximum scaffold sequence length (bp) | 172,205,748 |
| Minimum scaffold sequence length (bp) | 1,000 |
| Average scaffold sequence length (bp) | 2,397,437 |
| Scaffold N50 (bp) | 75,915,673 |
| Scaffold N90 (bp) | 4,512,364 |