- Scientific Name
- Vigna unguiculata
- Common Names
- cowpea; Phaseolus unguiculatus
- Bioproject
- PRJCA027511
- Biosample
- SAMC3939056
- Accession No.
- GWHEUBM00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- 1,525,411 (SNP), 353,609 (Indel)
- Submitter Organization
- Agricultural College, Nanjing Agricultural University
- Contact
- Longfei Wang, wanglongfei@njau.edu.cn
- Sequence author(s)
- Longfei Wang
- Released Date
- 2025-03-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.16.1
- Sequencing & coverage
- Pacbio CCS 34
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 546,363,311 |
| GC content | 33.23% |
| Chromosomes sequence No. | 11 |
| Genome sequence No. | 70 |
| Maximum genome sequence length (bp) | 69,867,246 |
| Minimum genome sequence length (bp) | 1,213 |
| Average genome sequence length (bp) | 7,805,190 |
| Genome sequence N50 (bp) | 48,610,798 |
| Genome sequence N90 (bp) | 42,216,206 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 54,193 | 54,193 |
| Others | 124 | 124 |
| Total | 54,317 | 54,317 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 4,877 | 4,877 |
| chr10 | 3,448 | 3,448 |
| chr11 | 4,143 | 4,143 |
| chr2 | 4,067 | 4,067 |
| chr3 | 8,603 | 8,603 |
| chr4 | 3,584 | 3,584 |
| chr5 | 5,558 | 5,558 |
| chr6 | 4,599 | 4,599 |
| chr7 | 5,646 | 5,646 |
| chr8 | 4,217 | 4,217 |
| chr9 | 5,451 | 5,451 |
| Others | 124 | 124 |
| Total | 54,317 | 54,317 |