- Scientific Name
- Cajanus cajan
- Common Names
- pigeon pea;
- Bioproject
- PRJCA027511
- Biosample
- SAMC3939064
- Accession No.
- GWHEUBU00000000.1
- GWH reannotation accession
- -
- GSA raw reads
- -
- GVM variations of the species
- -
- Submitter Organization
- Agricultural College, Nanjing Agricultural University
- Contact
- Longfei Wang, wanglongfei@njau.edu.cn
- Sequence author(s)
- Longfei Wang
- Released Date
- 2025-03-15
- Assembly Level
- Draft genome in chromosome level
- Genome Representation
- Full Genome
- Assembly method
- hifiasm v0.16.1
- Sequencing & coverage
- Pacbio CCS 49
- Download
- DNA GFF RNA CDS Protein
- Publication(s)
- -
Statistics of Genome Assembly
| Genome size (bp) | 761,635,125 |
| GC content | 34.75% |
| Chromosomes sequence No. | 11 |
| Genome sequence No. | 38 |
| Maximum genome sequence length (bp) | 92,665,261 |
| Minimum genome sequence length (bp) | 17,576 |
| Average genome sequence length (bp) | 20,043,030 |
| Genome sequence N50 (bp) | 76,032,176 |
| Genome sequence N90 (bp) | 53,372,253 |
Annotation of Whole Genome Assembly
| Protein | Total | |
|---|---|---|
| Chromosome | 56,311 | 56,311 |
| Others | 85 | 85 |
| Total | 56,396 | 56,396 |
Annotation Details
| ChrID | Protein | Total |
|---|---|---|
| chr1 | 4,418 | 4,418 |
| chr10 | 4,873 | 4,873 |
| chr11 | 4,079 | 4,079 |
| chr2 | 4,245 | 4,245 |
| chr3 | 6,041 | 6,041 |
| chr4 | 5,585 | 5,585 |
| chr5 | 3,948 | 3,948 |
| chr6 | 5,791 | 5,791 |
| chr7 | 5,811 | 5,811 |
| chr8 | 5,181 | 5,181 |
| chr9 | 6,339 | 6,339 |
| Others | 85 | 85 |
| Total | 56,396 | 56,396 |